STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
LBAT_0486Hydrolase; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family. (256 aa)    
Predicted Functional Partners:
LBAT_0485
Conserved hypothetical protein.
 
  
 0.931
LBAT_0487
Conserved hypothetical protein.
  
    0.909
LBAT_0484
UDP-sugar hydrolase; Belongs to the 5'-nucleotidase family.
  
  
 0.862
LBAT_0483
Conserved hypothetical protein.
       0.792
LBAT_0482
Glycerophosphoryl diester phosphodiesterase.
       0.555
LBAT_0419
DNA-directed RNA polymerase sigma factor.
  
    0.504
LBAT_0770
Recombination ATPase.
 
      0.463
cmk
Cytidylate kinase.
  
    0.446
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
    0.423
LBAT_0194
RNA polymerase sigma factor.
  
    0.419
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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