STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0531ABC transporter ATP-binding component. (246 aa)    
Predicted Functional Partners:
LBAT_0742
Truncated ABC transporter ATP-binding component.
    
0.928
ecfA
Cobalt ABC transporter ATP-binding component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.925
LBAT_0532
ABC transporter permease component.
 
  
 0.925
LBAT_1527
ABC transporter ATP-binding component.
 
    
0.925
LBAT_1373
Sugar ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
 
    
0.916
LBAT_0327
Amino acid ABC transporter ATP-binding component.
 
    
0.911
LBAT_1259
Glutamine ABC transporter ATP-binding component.
 
    
0.907
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.831
LBAT_1634
ABC transporter ATP-binding component.
 
     
0.790
LBAT_0530
Conserved hypothetical protein.
  
  
 0.712
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.