STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0567N-acetylglucosamine kinase. (306 aa)    
Predicted Functional Partners:
LBAT_1079
Integral membrane protein.
  
     0.632
LBAT_0164
N-acetylglucosamine-6-phosphate deacetylase.
  
 
 0.594
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.583
LBAT_1370
Putative metallo-beta-lactamase.
  
     0.567
LBAT_0568
ABC transporter permease component.
       0.528
LBAT_1459
Conserved hypothetical protein.
  
     0.517
LBAT_0157
Conserved hypothetical protein.
  
     0.483
LBAT_0129
Conserved hypothetical protein.
 
     0.453
LBAT_0629
Sodium ATP synthase subunit.
  
     0.429
LBAT_1369
Glycerol-3-phosphate ABC transporter substrate binding component.
 
    0.425
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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