STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0568ABC transporter permease component. (843 aa)    
Predicted Functional Partners:
LBAT_0569
Penicillin-binding protein.
       0.683
LBAT_1139
Glycosyltransferase.
 
  
 0.681
LBAT_1567
Conserved hypothetical protein.
  
     0.671
LBAT_0977
Conserved hypothetical protein.
  
     0.653
LBAT_0848
Enterolysin A.
  
     0.548
LBAT_0567
N-acetylglucosamine kinase.
       0.528
LBAT_0478
Conserved hypothetical protein.
  
     0.526
LBAT_1134
Acetyltransferase.
 
     0.510
LBAT_0682
acyl-CoA thioesterase.
  
     0.454
LBAT_1216
Conserved hypothetical protein.
  
     0.448
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.