STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0569Penicillin-binding protein. (695 aa)    
Predicted Functional Partners:
LBAT_1049
Cell division membrane protein; Belongs to the SEDS family.
 
 
 0.933
LBAT_1025
Cell division protein FtsI/penicillin-binding protein.
 
  
0.930
divIB
Cell division proteins FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.886
LBAT_1034
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.878
LBAT_0996
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 0.809
LBAT_0881
Penicillin binding protein 1A.
 
 
 
 0.807
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
 0.745
LBAT_1210
Competence negative regulator; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
  
  
 0.720
LBAT_0574
Rhodanese-related sulfurtransferase.
 
     0.705
rpmG-2
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.694
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.