STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnAGlutamine synthase. (445 aa)    
Predicted Functional Partners:
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.962
LBAT_0598
Truncated carbamoyl phosphate synthase large subunit; Belongs to the CarB family.
  
 0.925
LBAT_0599
Truncated carbamoyl phosphate synthase large subunit; Belongs to the CarB family.
  
 0.925
LBAT_0893
Carbamoyl phosphate synthase large subunit; Belongs to the CarB family.
  
 0.925
carA
Carbamoyl phosphate synthase small subunit; Belongs to the CarA family.
  
 
 0.921
LBAT_0892
Carbamoyl phosphate synthase small subunit.
  
 
 0.921
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.884
LBAT_0333
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.866
LBAT_1444
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
     
  0.800
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.779
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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