STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0682acyl-CoA thioesterase. (232 aa)    
Predicted Functional Partners:
LBAT_0681
uracil-DNA glycosylase.
 
    0.825
LBAT_0629
Sodium ATP synthase subunit.
  
     0.659
LBAT_0848
Enterolysin A.
 
    0.642
LBAT_1272
Acetyltransferase.
  
     0.596
LBAT_1567
Conserved hypothetical protein.
  
     0.562
LBAT_1474
Hydrolase.
  
   
 0.542
LBAT_0093
Conserved hypothetical protein.
  
     0.531
LBAT_0680
Hypothetical protein.
       0.525
LBAT_0977
Conserved hypothetical protein.
  
     0.511
LBAT_1338
Conserved hypothetical protein.
 
 
 0.506
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.