STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0744Truncated ABC transporter permease component. (106 aa)    
Predicted Functional Partners:
LBAT_0743
Truncated ABC transporter permease component.
     0.992
LBAT_0742
Truncated ABC transporter ATP-binding component.
 
  
 0.958
LBAT_0745
Alcohol dehydrogenase.
  
    0.532
LBAT_1242
Nitroreductase.
  
  
 0.493
LBAT_1345
NADPH-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.493
LBAT_1579
Conserved hypothetical protein.
  
  
 0.461
LBAT_0741
Truncated ABC transporter ATP-binding component.
       0.440
LBAT_0531
ABC transporter ATP-binding component.
  
  
 0.430
LBAT_1527
ABC transporter ATP-binding component.
  
  
 0.430
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.