STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0773Transcriptional regulator. (330 aa)    
Predicted Functional Partners:
LBAT_1213
Phosphocarrier protein HPr.
   
 
 0.775
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.742
LBAT_0944
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 
 0.718
LBAT_0454
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
 0.712
LBAT_0774
Alpha-glucosidase.
  
  
 0.657
LBAT_0775
PTS system sucrose-specific IIABC components.
    
 0.632
LBAT_0804
Transcriptional antiterminator.
   
  
 0.554
LBAT_1322
Transcriptional regulator.
  
   
 0.516
LBAT_1484
Putative ribose ABC transporter substrate binding component.
 
  
 0.515
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.511
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.