Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LBAT_0775PTS system sucrose-specific IIABC components. (657 aa)    
Predicted Functional Partners:
LBAT_0454
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 0.989
LBAT_0263
PTS system sucrose-specific IIBC components.
 
0.948
LBAT_0783
PTS system sucrose-specific IIBC components.
 
 
0.929
LBAT_1213
Phosphocarrier protein HPr.
  
 
 0.910
LBAT_0774
Alpha-glucosidase.
  
  
 0.813
LBAT_0804
Transcriptional antiterminator.
 
 
 0.785
LBAT_0773
Transcriptional regulator.
  
  
 0.627
LBAT_1437
PTS system fructose-specific IIABC components.
   
  
 0.567
LBAT_0064
PTS system trehalose-specific IIABC components.
 
 
0.535
LBAT_0776
Hypothetical protein.
       0.494
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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