Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LBAT_0790Putative glycosyl hydrolase. (408 aa)    
Predicted Functional Partners:
LBAT_0791
Putative glycosyl hydrolase.
     0.988
LBAT_0789
PTS system IIC component.
 
  
 0.847
LBAT_0785
Conserved hypothetical protein.
 
    0.683
LBAT_0786
Putative transcriptional antiterminator.
 
    0.631
LBAT_0788
PTS system IIB component.
 
    0.617
LBAT_0787
PTS system IIA component.
  
    0.571
cmk
Cytidylate kinase.
  
    0.498
LBAT_1437
PTS system fructose-specific IIABC components.
  
  
 0.498
LBAT_0347
ATPase; Belongs to the ClpA/ClpB family.
   
    0.493
LBAT_1215
ATP-dependent Clp protease ATP-binding subunit; Belongs to the ClpA/ClpB family.
   
    0.493
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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