STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0796Fumarate reductase flavoprotein subunit. (384 aa)    
Predicted Functional Partners:
LBAT_0080
Fumarate reductase flavoprotein subunit.
 
   
 0.836
LBAT_1462
Oxidoreductase.
      0.827
LBAT_1463
Oxidoreductase.
      0.793
LBAT_0797
Fumarate reductase.
 
    
0.769
LBAT_0798
Cation transport protein.
 
    0.765
LBAT_0793
Hypothetical protein.
 
     0.582
LBAT_0078
Fumarate reductase flavoprotein subunit.
 
   
0.565
LBAT_0077
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
  
 0.546
LBAT_1460
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
  
 0.525
LBAT_0795
Transposase.
       0.505
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.