Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LBAT_0810Restriction-modification system M subunit. (537 aa)    
Predicted Functional Partners:
LBAT_0813
Restriction-modification system S subunit.
 
 0.998
LBAT_0814
Restriction-modification system restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 0.985
LBAT_0811
Restriction modification system DNA specificity domain protein.
   
 0.969
LBAT_0812
Phage integrase; Belongs to the 'phage' integrase family.
 
   
 0.757
rplL
50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
 
 0.620
LBAT_0809
Succinyl-diaminopimelate desuccinylase.
   
   0.567
LBAT_0073
Phage helicase.
     
 0.545
LBAT_0894
Fibronectin binding protein.
  
    0.497
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.496
LBAT_1277
Hypothetical protein.
  
  
 0.457
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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