Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LBAT_0839 | LBAT_0840 | LBAT_0839 | LBAT_0840 | Conserved hypothetical protein. | Phosphate starvation-induced protein. | 0.811 |
| LBAT_0839 | era | LBAT_0839 | LBAT_0842 | Conserved hypothetical protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.818 |
| LBAT_0839 | glyQ | LBAT_0839 | LBAT_0844 | Conserved hypothetical protein. | glycyl-tRNA synthase alpha subunit. | 0.474 |
| LBAT_0839 | recO | LBAT_0839 | LBAT_0843 | Conserved hypothetical protein. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.811 |
| LBAT_0839 | ybeY | LBAT_0839 | LBAT_0841 | Conserved hypothetical protein. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.811 |
| LBAT_0840 | LBAT_0839 | LBAT_0840 | LBAT_0839 | Phosphate starvation-induced protein. | Conserved hypothetical protein. | 0.811 |
| LBAT_0840 | era | LBAT_0840 | LBAT_0842 | Phosphate starvation-induced protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.910 |
| LBAT_0840 | glyQ | LBAT_0840 | LBAT_0844 | Phosphate starvation-induced protein. | glycyl-tRNA synthase alpha subunit. | 0.619 |
| LBAT_0840 | recO | LBAT_0840 | LBAT_0843 | Phosphate starvation-induced protein. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.934 |
| LBAT_0840 | ybeY | LBAT_0840 | LBAT_0841 | Phosphate starvation-induced protein. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.979 |
| era | LBAT_0839 | LBAT_0842 | LBAT_0839 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Conserved hypothetical protein. | 0.818 |
| era | LBAT_0840 | LBAT_0842 | LBAT_0840 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Phosphate starvation-induced protein. | 0.910 |
| era | glyQ | LBAT_0842 | LBAT_0844 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | glycyl-tRNA synthase alpha subunit. | 0.628 |
| era | recO | LBAT_0842 | LBAT_0843 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.935 |
| era | ybeY | LBAT_0842 | LBAT_0841 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.956 |
| glyQ | LBAT_0839 | LBAT_0844 | LBAT_0839 | glycyl-tRNA synthase alpha subunit. | Conserved hypothetical protein. | 0.474 |
| glyQ | LBAT_0840 | LBAT_0844 | LBAT_0840 | glycyl-tRNA synthase alpha subunit. | Phosphate starvation-induced protein. | 0.619 |
| glyQ | era | LBAT_0844 | LBAT_0842 | glycyl-tRNA synthase alpha subunit. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.628 |
| glyQ | recO | LBAT_0844 | LBAT_0843 | glycyl-tRNA synthase alpha subunit. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.643 |
| glyQ | ybeY | LBAT_0844 | LBAT_0841 | glycyl-tRNA synthase alpha subunit. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.622 |
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