sigA protein (Lactobacillus acetotolerans) - STRING interaction network

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sigA

RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (405 aa)

Predicted Functional Partners:

dnaG

0.997

rpoB

0.976

rpoC

0.967

rpoA

0.953

rpoZ

0.918

LBAT_0999

0.893

LBAT_1584

0.878

LBAT_0738

0.852

LBAT_0105

0.841

glyQ

0.798

Your Current Organism:

Lactobacillus acetotolerans

NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LBAT_0105	rpoA	LBAT_0105	LBAT_0381	Glutathione S-transferase; Belongs to the GST superfamily.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.829
LBAT_0105	rpoB	LBAT_0105	LBAT_0348	Glutathione S-transferase; Belongs to the GST superfamily.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.829
LBAT_0105	rpoC	LBAT_0105	LBAT_0349	Glutathione S-transferase; Belongs to the GST superfamily.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.855
LBAT_0105	rpoZ	LBAT_0105	LBAT_0644	Glutathione S-transferase; Belongs to the GST superfamily.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.829
LBAT_0105	sigA	LBAT_0105	LBAT_0847	Glutathione S-transferase; Belongs to the GST superfamily.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.841
LBAT_0738	rpoA	LBAT_0738	LBAT_0381	Transcriptional regulator.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.843
LBAT_0738	rpoB	LBAT_0738	LBAT_0348	Transcriptional regulator.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.861
LBAT_0738	rpoC	LBAT_0738	LBAT_0349	Transcriptional regulator.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.844
LBAT_0738	rpoZ	LBAT_0738	LBAT_0644	Transcriptional regulator.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.822
LBAT_0738	sigA	LBAT_0738	LBAT_0847	Transcriptional regulator.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.852
LBAT_0999	rpoA	LBAT_0999	LBAT_0381	Conserved hypothetical protein.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.939
LBAT_0999	rpoB	LBAT_0999	LBAT_0348	Conserved hypothetical protein.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.927
LBAT_0999	rpoC	LBAT_0999	LBAT_0349	Conserved hypothetical protein.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.927
LBAT_0999	rpoZ	LBAT_0999	LBAT_0644	Conserved hypothetical protein.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.938
LBAT_0999	sigA	LBAT_0999	LBAT_0847	Conserved hypothetical protein.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.893
LBAT_1584	rpoA	LBAT_1584	LBAT_0381	Transcriptional regulator.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.858
LBAT_1584	rpoB	LBAT_1584	LBAT_0348	Transcriptional regulator.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.875
LBAT_1584	rpoC	LBAT_1584	LBAT_0349	Transcriptional regulator.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.867
LBAT_1584	rpoZ	LBAT_1584	LBAT_0644	Transcriptional regulator.	DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.843
LBAT_1584	sigA	LBAT_1584	LBAT_0847	Transcriptional regulator.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.878

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