Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_09482',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family. (518 aa)    
Predicted Functional Partners:
udk
Uridine kinase.
 
 
  0.923
LBAT_0949
Transposase.
       0.570
LBAT_0484
UDP-sugar hydrolase; Belongs to the 5'-nucleotidase family.
 
    
0.563
LBAT_0173
Phosphonate ABC transporter permease component.
 
   
 0.516
LBAT_1597
Sortase.
   
  
 0.493
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
       0.479
LBAT_0169
Phosphonate ABC transporter ATP-binding component.
 
   
 0.471
LBAT_0170
Phosphonate ABC transporter substrate binding component.
 
   
 0.470
phnE
Phosphonate ABC transporter permease component.
 
   
 0.442
phnC
Phosphonate ABC transporter ATP-binding component; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
   
 0.411
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.