STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_0977Conserved hypothetical protein. (536 aa)    
Predicted Functional Partners:
LBAT_0568
ABC transporter permease component.
  
     0.653
LBAT_1567
Conserved hypothetical protein.
  
    0.567
LBAT_0022
Exopolysaccharide biosynthesis protein.
  
     0.560
LBAT_0017
Mg2 transport protein.
  
  
 0.557
LBAT_0682
acyl-CoA thioesterase.
  
     0.511
LBAT_0976
Transposase.
       0.509
LBAT_0679
Conserved hypothetical protein.
  
     0.506
LBAT_1409
Conserved hypothetical protein.
  
     0.482
LBAT_0087
Glucosyltransferase.
  
     0.476
LBAT_1008
Conserved hypothetical protein.
  
     0.471
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.