STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1004Conserved hypothetical protein. (215 aa)    
Predicted Functional Partners:
LBAT_1005
Phosphoglycerate mutase.
 
     0.820
recD2
Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
       0.792
LBAT_1002
Conserved hypothetical protein.
       0.773
LBAT_1426
Conserved hypothetical protein.
  
     0.750
LBAT_0985
Conserved hypothetical protein.
  
     0.746
LBAT_1221
Conserved hypothetical protein.
  
     0.737
LBAT_0295
Conserved hypothetical protein.
  
     0.730
LBAT_0180
Conserved hypothetical protein.
  
     0.718
LBAT_0396
2',3'-cyclic nucleotide 3'-phosphodiesterase.
  
     0.717
LBAT_0155
Conserved hypothetical protein.
  
    0.713
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.