STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1034Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (283 aa)    
Predicted Functional Partners:
LBAT_1035
Rod shape-determining protein MreB.
 
 
 0.974
LBAT_1052
Rod shape-determining protein MreB.
 
 
 0.908
LBAT_0569
Penicillin-binding protein.
 
 
 0.878
LBAT_1036
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.853
LBAT_1025
Cell division protein FtsI/penicillin-binding protein.
 
 
 0.806
mreD
Rod shape-determining protein MreD.
       0.793
LBAT_1049
Cell division membrane protein; Belongs to the SEDS family.
 
  
 0.686
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.619
LBAT_1308
Lipoprotein.
  
    0.579
LBAT_1038
Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
       0.542
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.