STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1076Histidine kinase. (488 aa)    
Predicted Functional Partners:
LBAT_1077
Truncated response regulator.
 
 0.986
LBAT_1447
Two-component response regulator.
 
 0.938
LBAT_0097
Two-component response regulator.
 
 0.930
LBAT_0555
Two-component response regulator.
 
 0.915
LBAT_1581
ABC transporter ATP-binding component.
 
 
 0.773
LBAT_1484
Putative ribose ABC transporter substrate binding component.
    
 
 0.737
LBAT_1148
Conserved hypothetical protein.
  
 
 0.694
LBAT_0278
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.689
LBAT_1079
Integral membrane protein.
       0.559
LBAT_1486
Two-component response regulator.
  
 
 0.528
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.