STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1161Competence protein. (427 aa)    
Predicted Functional Partners:
LBAT_1160
Competence protein.
  
  
 0.876
LBAT_1098
Competence protein.
   
  
 0.779
LBAT_0991
Competence protein ComEA.
   
  
 0.765
LBAT_1162
Conserved hypothetical protein.
     
 0.722
LBAT_0990
Competence protein ComEC.
   
  
 0.663
LBAT_0008
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.660
LBAT_1095
Conserved hypothetical protein.
   
  
 0.636
LBAT_0921
DNA processing protein chain A.
  
  
 0.625
LBAT_1096
Competence protein.
  
  
 0.614
LBAT_1097
Competence protein.
   
  
 0.611
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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