STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1186Transcriptional regulator. (352 aa)    
Predicted Functional Partners:
LBAT_1185
CDP-diacylglycerol- phosphatephosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.951
LBAT_1035
Rod shape-determining protein MreB.
 
 
 0.888
LBAT_1052
Rod shape-determining protein MreB.
 
 
 0.881
LBAT_1187
3-oxoacyl-[acyl-carrier protein] reductase.
  
    0.714
LBAT_0569
Penicillin-binding protein.
  
 
 0.636
LBAT_1184
2,5-diketo-D-gluconate reductase.
       0.559
LBAT_1034
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 
 0.551
LBAT_1025
Cell division protein FtsI/penicillin-binding protein.
  
 
 0.500
LBAT_1049
Cell division membrane protein; Belongs to the SEDS family.
   
  
 0.492
rny
Phosphodiesterase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
  
    0.466
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.