STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1214Conserved hypothetical protein. (60 aa)    
Predicted Functional Partners:
LBAT_1219
Conserved hypothetical protein.
  
     0.618
LBAT_1079
Integral membrane protein.
  
     0.598
LBAT_1216
Conserved hypothetical protein.
 
     0.586
LBAT_1419
Conserved hypothetical protein.
  
     0.585
LBAT_0985
Conserved hypothetical protein.
  
     0.539
LBAT_0396
2',3'-cyclic nucleotide 3'-phosphodiesterase.
  
     0.538
LBAT_1212
Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
       0.526
LBAT_1213
Phosphocarrier protein HPr.
       0.526
LBAT_1215
ATP-dependent Clp protease ATP-binding subunit; Belongs to the ClpA/ClpB family.
       0.498
LBAT_0129
Conserved hypothetical protein.
  
     0.489
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.