Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LBAT_1218 | LBAT_1219 | LBAT_1218 | LBAT_1219 | Putative hemolysin. | Conserved hypothetical protein. | 0.670 |
| LBAT_1218 | guaA | LBAT_1218 | LBAT_0315 | Putative hemolysin. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.523 |
| LBAT_1218 | prfC | LBAT_1218 | LBAT_1217 | Putative hemolysin. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.855 |
| LBAT_1218 | recJ | LBAT_1218 | LBAT_0716 | Putative hemolysin. | single-stranded-DNA-specific exonuclease. | 0.475 |
| LBAT_1218 | ybeY | LBAT_1218 | LBAT_0841 | Putative hemolysin. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.428 |
| LBAT_1219 | LBAT_1218 | LBAT_1219 | LBAT_1218 | Conserved hypothetical protein. | Putative hemolysin. | 0.670 |
| LBAT_1219 | prfC | LBAT_1219 | LBAT_1217 | Conserved hypothetical protein. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.597 |
| guaA | LBAT_1218 | LBAT_0315 | LBAT_1218 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Putative hemolysin. | 0.523 |
| guaA | prfC | LBAT_0315 | LBAT_1217 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.713 |
| guaA | ybeY | LBAT_0315 | LBAT_0841 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.400 |
| prfC | LBAT_1218 | LBAT_1217 | LBAT_1218 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Putative hemolysin. | 0.855 |
| prfC | LBAT_1219 | LBAT_1217 | LBAT_1219 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Conserved hypothetical protein. | 0.597 |
| prfC | guaA | LBAT_1217 | LBAT_0315 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.713 |
| recJ | LBAT_1218 | LBAT_0716 | LBAT_1218 | single-stranded-DNA-specific exonuclease. | Putative hemolysin. | 0.475 |
| ybeY | LBAT_1218 | LBAT_0841 | LBAT_1218 | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Putative hemolysin. | 0.428 |
| ybeY | guaA | LBAT_0841 | LBAT_0315 | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.400 |