STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1226hydroxymethylglutaryl-CoA synthase. (387 aa)    
Predicted Functional Partners:
LBAT_1227
hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
 
 0.999
LBAT_1229
Truncated acetyl-CoA acetyltransferase.
  
 0.998
LBAT_1228
Truncated acetyl-CoA acetyltransferase.
  
 0.985
LBAT_0872
Diphosphomevalonate decarboxylase.
 
 
 0.961
LBAT_0873
Mevalonate kinase.
 
  
 0.926
LBAT_0871
Phosphomevalonate kinase.
 
  
 0.923
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.907
fabF
Beta-ketoacyl-[acyl-carrier protein] synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.676
LBAT_0638
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 
 0.583
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.581
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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