STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1239Conserved hypothetical protein. (235 aa)    
Predicted Functional Partners:
LBAT_1238
ATP-dependent RNA helicase.
       0.817
LBAT_1237
PTS system cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.775
LBAT_1133
Conserved hypothetical protein.
  
     0.679
LBAT_0151
Transcriptional regulator.
  
   
 0.662
LBAT_1364
Conserved hypothetical protein.
  
     0.643
LBAT_1367
Beta-lactamase.
  
     0.598
LBAT_0099
Conserved hypothetical protein.
  
     0.597
LBAT_0420
Conserved hypothetical protein.
  
     0.566
LBAT_0188
Conserved hypothetical protein.
  
     0.531
mreD
Rod shape-determining protein MreD.
  
     0.529
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.