Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LBAT_1256Glutamine ABC transporter permease component. (217 aa)    
Predicted Functional Partners:
LBAT_1259
Glutamine ABC transporter ATP-binding component.
 0.996
LBAT_1258
glutamine-ABC transporter ATP-binding component.
 0.994
LBAT_1257
Glutamine ABC transporter permease component.
 
  
 
0.981
LBAT_1389
Amino acid ABC transporter ATP-binding component.
 
 0.940
glnQ
Glutamine ABC transporter ATP-binding component.
 
 0.931
LBAT_0131
Amino acid ABC transporter ATP-binding component.
 
 0.923
LBAT_0327
Amino acid ABC transporter ATP-binding component.
 
 0.850
LBAT_1390
Amino acid ABC transporter ATP-binding component.
 
 0.799
LBAT_1260
Exopolyphosphatase.
       0.716
LBAT_0132
Amino acid ABC transporter permease component.
 
0.572
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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