STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1312Conserved hypothetical protein; Belongs to the SprT family. (153 aa)    
Predicted Functional Partners:
LBAT_1313
Glycosyltransferase.
       0.765
LBAT_1315
Teichoic acid biosynthesis protein.
       0.742
LBAT_1314
Capsular polysaccharide synthesis protein.
       0.741
LBAT_0445
DNA replication initiation control protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.618
LBAT_0992
Peptidase.
 
     0.595
nadE
NAD synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.525
LBAT_1316
Cation-transporting P-type ATPase.
       0.524
LBAT_0883
Conserved hypothetical protein; Belongs to the UPF0398 family.
  
     0.483
LBAT_1318
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
       0.463
LBAT_0549
GTP-binding protein.
  
     0.438
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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