STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1313Glycosyltransferase. (232 aa)    
Predicted Functional Partners:
LBAT_1314
Capsular polysaccharide synthesis protein.
 
  
 0.877
LBAT_1315
Teichoic acid biosynthesis protein.
 
     0.823
LBAT_1312
Conserved hypothetical protein; Belongs to the SprT family.
       0.768
LBAT_1319
Galactosyltransferase.
 
  
 0.551
LBAT_1316
Cation-transporting P-type ATPase.
       0.527
LBAT_0030
Glycosyltransferase.
  
 0.481
LBAT_1310
ATP-dependent DNA helicase.
 
     0.442
LBAT_0031
Exopolysaccharide biosynthesis protein.
 
     0.415
LBAT_1311
N-acetylmuramidase.
       0.410
nadE
NAD synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.407
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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