STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1315Teichoic acid biosynthesis protein. (382 aa)    
Predicted Functional Partners:
LBAT_1314
Capsular polysaccharide synthesis protein.
 
  
 0.874
LBAT_1313
Glycosyltransferase.
 
     0.823
LBAT_1321
Glycerol-3-phosphate cytidylyltransferase.
 
  
 0.822
LBAT_1312
Conserved hypothetical protein; Belongs to the SprT family.
       0.744
LBAT_0985
Conserved hypothetical protein.
  
     0.741
LBAT_0396
2',3'-cyclic nucleotide 3'-phosphodiesterase.
  
     0.737
LBAT_0151
Transcriptional regulator.
  
     0.728
LBAT_1320
UDP-N-acetyl-D-mannosamine transferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
  
 
 0.719
LBAT_1133
Conserved hypothetical protein.
  
     0.711
LBAT_0129
Conserved hypothetical protein.
  
     0.705
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.