STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1338Conserved hypothetical protein. (238 aa)    
Predicted Functional Partners:
LBAT_1192
DNA translocase; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.950
LBAT_0848
Enterolysin A.
 
  
 0.788
LBAT_1367
Beta-lactamase.
 
   
 0.774
LBAT_0243
Conserved hypothetical protein.
  
     0.767
LBAT_1364
Conserved hypothetical protein.
  
     0.762
LBAT_0074
Penicillin-binding protein.
  
     0.754
LBAT_0258
Penicillin-binding protein.
  
     0.752
LBAT_0862
Conserved hypothetical protein.
  
     0.746
LBAT_0196
Amidase.
 
     0.741
LBAT_1133
Conserved hypothetical protein.
  
     0.727
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.