Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1370Putative metallo-beta-lactamase. (431 aa)    
Predicted Functional Partners:
rnj
Metallo-beta-lactamase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
  
 0.936
rnj-2
Metallo-beta-lactamase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
  
 0.934
LBAT_1369
Glycerol-3-phosphate ABC transporter substrate binding component.
 
     0.928
LBAT_1372
Sugar ABC transporter permease component.
 
     0.919
LBAT_1373
Sugar ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
 
     0.919
LBAT_1371
Sugar ABC transporter permease component.
 
     0.902
LBAT_1079
Integral membrane protein.
  
     0.680
LBAT_1426
Conserved hypothetical protein.
  
     0.666
LBAT_1377
Conserved hypothetical protein.
 
 
   0.641
LBAT_0638
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
 
    0.578
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
Server load: low (18%) [HD]