STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1371Sugar ABC transporter permease component. (274 aa)    
Predicted Functional Partners:
LBAT_1372
Sugar ABC transporter permease component.
 
 0.999
LBAT_1373
Sugar ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
 
 0.992
LBAT_1369
Glycerol-3-phosphate ABC transporter substrate binding component.
 
 0.988
LBAT_1504
Maltose ABC transporter ATP-binding component.
 
 0.969
LBAT_1370
Putative metallo-beta-lactamase.
 
     0.902
LBAT_1502
Maltose ABC transporter permease component.
 
 0.887
LBAT_1487
Conserved hypothetical protein.
  
 
 0.797
LBAT_1488
Conserved hypothetical protein.
  
 
 0.797
LBAT_1437
PTS system fructose-specific IIABC components.
   
  
 0.503
LBAT_0064
PTS system trehalose-specific IIABC components.
   
  
 0.454
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.