STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1390Amino acid ABC transporter ATP-binding component. (206 aa)    
Predicted Functional Partners:
LBAT_1391
Amino acid ABC transporter permease component.
 
 0.997
LBAT_1389
Amino acid ABC transporter ATP-binding component.
 
 
 0.972
LBAT_0153
Glutamine ABC transporter substrate binding and permease components.
 
 0.887
LBAT_0132
Amino acid ABC transporter permease component.
 
 0.864
LBAT_1449
ABC transporter ATP-binding component.
 
     
0.861
LBAT_1450
ABC transporter ATP-binding component.
 
     
0.815
LBAT_1256
Glutamine ABC transporter permease component.
 
 0.799
LBAT_1388
Acetyltransferase.
       0.773
LBAT_0326
Amino acid ABC transporter permease component.
 
 
 0.770
LBAT_1257
Glutamine ABC transporter permease component.
 
 0.751
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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