Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LBAT_1435Metal ion ABC transporter ATP-binding component. (217 aa)    
Predicted Functional Partners:
LBAT_1434
Metal ion ABC transporter permease component.
 
 
 0.999
LBAT_1436
Metal ion ABC transporter substrate binding component; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.997
LBAT_0742
Truncated ABC transporter ATP-binding component.
 
    0.613
LBAT_0661
Oligopeptide ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
 
      0.608
LBAT_1142
Ferric uptake regulator; Belongs to the Fur family.
  
  
 0.602
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.520
LBAT_0247
Deoxyribonuclease.
 
    0.493
LBAT_1433
L-lactate oxidase.
  
    0.486
LBAT_0622
biotin-[acetyl-CoA-carboxylase] ligase.
  
    0.481
polA
DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
    0.468
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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