STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1462Oxidoreductase. (182 aa)    
Predicted Functional Partners:
LBAT_1463
Oxidoreductase.
 
  
 
0.978
LBAT_0078
Fumarate reductase flavoprotein subunit.
      0.907
LBAT_0710
Riboflavin kinase; Belongs to the ribF family.
    
  0.903
LBAT_1345
NADPH-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family.
     
 0.902
LBAT_0797
Fumarate reductase.
      0.901
LBAT_0080
Fumarate reductase flavoprotein subunit.
      0.894
LBAT_0816
Fumarate reductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
      0.847
LBAT_0796
Fumarate reductase flavoprotein subunit.
      0.827
LBAT_1460
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.681
LBAT_1382
Conserved hypothetical protein.
    0.618
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.