Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LBAT_1468ABC transporter ATP-binding component. (224 aa)    
Predicted Functional Partners:
LBAT_1469
ABC transporter permease component.
 
 
 0.989
LBAT_1470
Transcriptional regulator.
 
 
 
 0.902
LBAT_0664
Oligopeptide ABC transporter permease component.
 
 
  
 0.875
pstB
Phosphate ABC transporter ATP-binding component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
  
0.857
LBAT_1107
ABC transporter ATP-binding component.
 
 
 0.747
LBAT_1105
ABC transporter permease component.
 
 
 0.727
LBAT_1391
Amino acid ABC transporter permease component.
 
 
  
 0.712
LBAT_1581
ABC transporter ATP-binding component.
  
 
 0.652
LBAT_1440
Conserved hypothetical protein.
  
 
 0.649
LBAT_0742
Truncated ABC transporter ATP-binding component.
 
  
 0.546
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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