STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1504Maltose ABC transporter ATP-binding component. (368 aa)    
Predicted Functional Partners:
LBAT_1501
Maltose ABC transporter permease component.
 
 0.995
LBAT_1502
Maltose ABC transporter permease component.
 
 0.992
LBAT_1503
Maltose ABC transporter permease component.
 
 0.990
LBAT_1371
Sugar ABC transporter permease component.
 
 0.973
LBAT_1372
Sugar ABC transporter permease component.
 
 
 0.962
LBAT_1373
Sugar ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
  
  
 
0.914
LBAT_1337
ABC transporter ATP-binding component.
     
0.882
LBAT_1369
Glycerol-3-phosphate ABC transporter substrate binding component.
 
 
 0.880
LBAT_1505
Beta-phosphoglucomutase.
    
 0.828
LBAT_1487
Conserved hypothetical protein.
  
 
 0.766
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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