STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1516Truncated oxidoreductase. (62 aa)    
Predicted Functional Partners:
LBAT_1517
Transcriptional regulator.
  
    0.774
LBAT_1514
Conserved hypothetical protein.
     
 0.608
LBAT_1513
4-carboxymuconolactone decarboxylase.
  
  
 0.562
LBAT_1515
Truncated oxidoreductase.
       0.547
LBAT_1518
Conserved hypothetical protein.
       0.484
LBAT_1519
Putative cell division protein.
       0.484
LBAT_1520
Conserved hypothetical protein.
       0.484
LBAT_1283
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
   
    0.432
LBAT_0087
Glucosyltransferase.
  
    0.409
LBAT_0088
Glycosyltransferase.
  
    0.409
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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