STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1519Putative cell division protein. (148 aa)    
Predicted Functional Partners:
LBAT_1520
Conserved hypothetical protein.
       0.782
LBAT_1518
Conserved hypothetical protein.
       0.773
LBAT_0194
RNA polymerase sigma factor.
  
     0.583
LBAT_1521
Hypothetical protein.
       0.548
LBAT_0629
Sodium ATP synthase subunit.
 
     0.546
LBAT_0191
Conserved hypothetical protein.
  
     0.512
LBAT_1516
Truncated oxidoreductase.
       0.484
LBAT_1517
Transcriptional regulator.
       0.484
LBAT_0679
Conserved hypothetical protein.
  
    0.453
LBAT_0500
Conserved hypothetical protein.
  
     0.446
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.