Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1522Transcriptional regulator. (230 aa)    
Predicted Functional Partners:
LBAT_1523
Protein-tyrosine phosphatase.
       0.773
LBAT_1213
Phosphocarrier protein HPr.
   
 
 0.753
LBAT_0944
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.666
LBAT_1507
Neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.645
LBAT_1503
Maltose ABC transporter permease component.
 
  
 0.608
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.564
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.510
LBAT_1502
Maltose ABC transporter permease component.
 
  
 0.498
LBAT_0421
Gluconate kinase.
 
 
 
 0.495
LBAT_1437
PTS system fructose-specific IIABC components.
     
 0.448
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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