STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBAT_1581ABC transporter ATP-binding component. (446 aa)    
Predicted Functional Partners:
LBAT_1107
ABC transporter ATP-binding component.
 
 
 0.843
LBAT_1105
ABC transporter permease component.
 
 
 0.832
LBAT_1104
ABC transporter ATP-binding component.
 
 
0.716
LBAT_1469
ABC transporter permease component.
  
 
 0.704
LBAT_1468
ABC transporter ATP-binding component.
 
 
0.702
LBAT_1441
ABC transporter ATP-binding component.
 
 
0.694
LBAT_1440
Conserved hypothetical protein.
  
 
 0.675
metG
methionyl-tRNA synthase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.550
LBAT_0990
Competence protein ComEC.
 
     0.542
LBAT_0649
Truncated protein kinase.
  
  
 0.495
Your Current Organism:
Lactobacillus acetotolerans
NCBI taxonomy Id: 1600
Other names: ATCC 43578, CCUG 32229, CIP 103180, DSM 20749, JCM 3825, L. acetotolerans, LMG 10751, LMG:10751, Lactobacillus acetitolerans, NBI 3014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.