STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEN83_00045Unannotated protein. (392 aa)    
Predicted Functional Partners:
BEN83_08515
Unannotated protein.
      
 0.558
mscL
Unannotated protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
      
 0.543
BEN83_00040
Unannotated protein.
       0.504
uppP
Unannotated protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.473
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
   
 
 0.460
acpP-2
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
 0.441
BEN83_00130
Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.428
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
     
 0.424
murI
Unannotated protein; Provides the (R)-glutamate required for cell wall biosynthesis.
  
  
 0.412
def
Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
     
 0.410
Your Current Organism:
Lactobacillus agilis
NCBI taxonomy Id: 1601
Other names: CCUG 31450, CIP 101264, DSM 20509, L. agilis, LMG 9186, LMG:9186, NRRL B-14856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.