Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BEN83_06255 | BEN83_06260 | GCA_001243975_00540 | GCA_001243975_00541 | Unannotated protein. | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.887 |
BEN83_06255 | BEN83_06265 | GCA_001243975_00540 | GCA_001243975_00542 | Unannotated protein. | Unannotated protein; Belongs to the UPF0473 family. | 0.649 |
BEN83_06255 | mutS2 | GCA_001243975_00540 | GCA_001243975_00539 | Unannotated protein. | Unannotated protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.779 |
BEN83_06255 | purC | GCA_001243975_00540 | GCA_001243975_01398 | Unannotated protein. | Unannotated protein; Belongs to the SAICAR synthetase family. | 0.799 |
BEN83_06255 | purE | GCA_001243975_00540 | GCA_001243975_01387 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.768 |
BEN83_06255 | purF | GCA_001243975_00540 | GCA_001243975_01402 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.916 |
BEN83_06255 | purL | GCA_001243975_00540 | GCA_001243975_01401 | Unannotated protein. | Unannotated protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the amm [...] | 0.674 |
BEN83_06255 | purM | GCA_001243975_00540 | GCA_001243975_01403 | Unannotated protein. | Unannotated protein. | 0.783 |
BEN83_06255 | purQ | GCA_001243975_00540 | GCA_001243975_01400 | Unannotated protein. | Unannotated protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the amm [...] | 0.729 |
BEN83_06255 | trxA | GCA_001243975_00540 | GCA_001243975_00538 | Unannotated protein. | Unannotated protein; Belongs to the thioredoxin family. | 0.675 |
BEN83_06260 | BEN83_06255 | GCA_001243975_00541 | GCA_001243975_00540 | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | Unannotated protein. | 0.887 |
BEN83_06260 | BEN83_06265 | GCA_001243975_00541 | GCA_001243975_00542 | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | Unannotated protein; Belongs to the UPF0473 family. | 0.621 |
BEN83_06260 | mutS2 | GCA_001243975_00541 | GCA_001243975_00539 | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | Unannotated protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.729 |
BEN83_06260 | trxA | GCA_001243975_00541 | GCA_001243975_00538 | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | Unannotated protein; Belongs to the thioredoxin family. | 0.546 |
BEN83_06265 | BEN83_06255 | GCA_001243975_00542 | GCA_001243975_00540 | Unannotated protein; Belongs to the UPF0473 family. | Unannotated protein. | 0.649 |
BEN83_06265 | BEN83_06260 | GCA_001243975_00542 | GCA_001243975_00541 | Unannotated protein; Belongs to the UPF0473 family. | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.621 |
BEN83_06265 | mutS2 | GCA_001243975_00542 | GCA_001243975_00539 | Unannotated protein; Belongs to the UPF0473 family. | Unannotated protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.619 |
BEN83_06265 | trxA | GCA_001243975_00542 | GCA_001243975_00538 | Unannotated protein; Belongs to the UPF0473 family. | Unannotated protein; Belongs to the thioredoxin family. | 0.426 |
mutS2 | BEN83_06255 | GCA_001243975_00539 | GCA_001243975_00540 | Unannotated protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | Unannotated protein. | 0.779 |
mutS2 | BEN83_06260 | GCA_001243975_00539 | GCA_001243975_00541 | Unannotated protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | Unannotated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.729 |
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