Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AYP69_05395 | BEN83_06905 | GCA_001243975_00666 | GCA_001243975_00667 | Unannotated protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.478 |
BEN83_03195 | BEN83_03225 | GCA_001243975_01627 | GCA_001243975_01633 | Unannotated protein. | Unannotated protein. | 0.987 |
BEN83_03195 | BEN83_06905 | GCA_001243975_01627 | GCA_001243975_00667 | Unannotated protein. | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.422 |
BEN83_03195 | flgD | GCA_001243975_01627 | GCA_001243975_01609 | Unannotated protein. | Unannotated protein. | 0.617 |
BEN83_03195 | fliE | GCA_001243975_01627 | GCA_001243975_01602 | Unannotated protein. | Unannotated protein. | 0.521 |
BEN83_03225 | BEN83_03195 | GCA_001243975_01633 | GCA_001243975_01627 | Unannotated protein. | Unannotated protein. | 0.987 |
BEN83_03225 | BEN83_06905 | GCA_001243975_01633 | GCA_001243975_00667 | Unannotated protein. | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.944 |
BEN83_03225 | flgD | GCA_001243975_01633 | GCA_001243975_01609 | Unannotated protein. | Unannotated protein. | 0.999 |
BEN83_03225 | fliE | GCA_001243975_01633 | GCA_001243975_01602 | Unannotated protein. | Unannotated protein. | 0.999 |
BEN83_06905 | AYP69_05395 | GCA_001243975_00667 | GCA_001243975_00666 | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Unannotated protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.478 |
BEN83_06905 | BEN83_03195 | GCA_001243975_00667 | GCA_001243975_01627 | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Unannotated protein. | 0.422 |
BEN83_06905 | BEN83_03225 | GCA_001243975_00667 | GCA_001243975_01633 | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Unannotated protein. | 0.944 |
BEN83_06905 | flgD | GCA_001243975_00667 | GCA_001243975_01609 | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Unannotated protein. | 0.422 |
BEN83_06905 | fliE | GCA_001243975_00667 | GCA_001243975_01602 | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Unannotated protein. | 0.422 |
BEN83_06905 | guaC | GCA_001243975_00667 | GCA_001243975_00668 | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Unannotated protein; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily. | 0.496 |
BEN83_06905 | metG | GCA_001243975_00667 | GCA_001243975_00223 | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.490 |
flgD | BEN83_03195 | GCA_001243975_01609 | GCA_001243975_01627 | Unannotated protein. | Unannotated protein. | 0.617 |
flgD | BEN83_03225 | GCA_001243975_01609 | GCA_001243975_01633 | Unannotated protein. | Unannotated protein. | 0.999 |
flgD | BEN83_06905 | GCA_001243975_01609 | GCA_001243975_00667 | Unannotated protein. | Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.422 |
flgD | fliE | GCA_001243975_01609 | GCA_001243975_01602 | Unannotated protein. | Unannotated protein. | 0.997 |
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