STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYP69_00770Unannotated protein. (345 aa)    
Predicted Functional Partners:
BEN83_02760
Unannotated protein.
   
 
 0.909
BEN83_02675
Unannotated protein; Belongs to the glutamate--cysteine ligase type 1 family.
     
  0.900
BEN83_10045
Unannotated protein.
  
 
 0.875
thrB
Unannotated protein; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.839
ldh
Unannotated protein; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.824
AYP69_07530
Unannotated protein; Belongs to the LDH/MDH superfamily.
  
 0.820
BEN83_01260
Unannotated protein.
     
  0.800
BEN83_10425
Unannotated protein; Belongs to the TPP enzyme family.
  
 
 0.618
BEN83_09895
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
     
 0.548
BEN83_09885
Unannotated protein.
  
   0.501
Your Current Organism:
Lactobacillus agilis
NCBI taxonomy Id: 1601
Other names: CCUG 31450, CIP 101264, DSM 20509, L. agilis, LMG 9186, LMG:9186, NRRL B-14856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.