Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BEN83_00825 | BEN83_00830 | GCA_001243975_01164 | GCA_001243975_01163 | Unannotated protein. | Unannotated protein. | 0.751 |
BEN83_00825 | BEN83_00835 | GCA_001243975_01164 | GCA_001243975_01162 | Unannotated protein. | Unannotated protein. | 0.753 |
BEN83_00825 | BEN83_00840 | GCA_001243975_01164 | GCA_001243975_01161 | Unannotated protein. | Unannotated protein. | 0.689 |
BEN83_00825 | BEN83_00845 | GCA_001243975_01164 | GCA_001243975_01160 | Unannotated protein. | Unannotated protein. | 0.565 |
BEN83_00825 | hprK | GCA_001243975_01164 | GCA_001243975_01159 | Unannotated protein. | Unannotated protein; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sour [...] | 0.424 |
BEN83_00825 | lgt | GCA_001243975_01164 | GCA_001243975_01158 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.410 |
BEN83_00830 | BEN83_00825 | GCA_001243975_01163 | GCA_001243975_01164 | Unannotated protein. | Unannotated protein. | 0.751 |
BEN83_00830 | BEN83_00835 | GCA_001243975_01163 | GCA_001243975_01162 | Unannotated protein. | Unannotated protein. | 0.996 |
BEN83_00830 | BEN83_00840 | GCA_001243975_01163 | GCA_001243975_01161 | Unannotated protein. | Unannotated protein. | 0.585 |
BEN83_00830 | BEN83_00845 | GCA_001243975_01163 | GCA_001243975_01160 | Unannotated protein. | Unannotated protein. | 0.518 |
BEN83_00830 | BEN83_01390 | GCA_001243975_01163 | GCA_001243975_00165 | Unannotated protein. | Unannotated protein. | 0.831 |
BEN83_00830 | lgt | GCA_001243975_01163 | GCA_001243975_01158 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.405 |
BEN83_00835 | BEN83_00825 | GCA_001243975_01162 | GCA_001243975_01164 | Unannotated protein. | Unannotated protein. | 0.753 |
BEN83_00835 | BEN83_00830 | GCA_001243975_01162 | GCA_001243975_01163 | Unannotated protein. | Unannotated protein. | 0.996 |
BEN83_00835 | BEN83_00840 | GCA_001243975_01162 | GCA_001243975_01161 | Unannotated protein. | Unannotated protein. | 0.564 |
BEN83_00835 | BEN83_00845 | GCA_001243975_01162 | GCA_001243975_01160 | Unannotated protein. | Unannotated protein. | 0.594 |
BEN83_00840 | BEN83_00825 | GCA_001243975_01161 | GCA_001243975_01164 | Unannotated protein. | Unannotated protein. | 0.689 |
BEN83_00840 | BEN83_00830 | GCA_001243975_01161 | GCA_001243975_01163 | Unannotated protein. | Unannotated protein. | 0.585 |
BEN83_00840 | BEN83_00835 | GCA_001243975_01161 | GCA_001243975_01162 | Unannotated protein. | Unannotated protein. | 0.564 |
BEN83_00840 | BEN83_00845 | GCA_001243975_01161 | GCA_001243975_01160 | Unannotated protein. | Unannotated protein. | 0.945 |
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