STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEN83_00720Unannotated protein. (313 aa)    
Predicted Functional Partners:
BEN83_00710
Unannotated protein.
 
 0.987
BEN83_00730
Unannotated protein.
 
  
 0.935
BEN83_00725
Unannotated protein.
 
  
 0.905
AYP69_00850
Unannotated protein.
 
 0.778
BEN83_00830
Unannotated protein.
 
 0.774
BEN83_09215
Unannotated protein.
 
 0.772
AYP69_07700
Unannotated protein.
 
 0.765
AYP69_04950
Unannotated protein.
 
 0.747
AYP69_00675
Unannotated protein.
    
 0.742
BEN83_01385
Unannotated protein.
 
 0.687
Your Current Organism:
Lactobacillus agilis
NCBI taxonomy Id: 1601
Other names: CCUG 31450, CIP 101264, DSM 20509, L. agilis, LMG 9186, LMG:9186, NRRL B-14856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.