STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEN83_00710Unannotated protein. (223 aa)    
Predicted Functional Partners:
BEN83_00720
Unannotated protein.
 
 0.987
BEN83_00730
Unannotated protein.
 
  
 0.903
BEN83_00725
Unannotated protein.
 
     0.882
BEN83_00835
Unannotated protein.
 
 0.846
BEN83_09210
Unannotated protein.
 
 0.808
BEN83_01390
Unannotated protein.
 
 0.707
BEN83_09815
Unannotated protein.
 
 0.682
BEN83_10315
Unannotated protein.
   0.663
BEN83_05495
Unannotated protein.
 
 0.657
BEN83_00705
Unannotated protein; Belongs to the ABC transporter superfamily.
     
 0.528
Your Current Organism:
Lactobacillus agilis
NCBI taxonomy Id: 1601
Other names: CCUG 31450, CIP 101264, DSM 20509, L. agilis, LMG 9186, LMG:9186, NRRL B-14856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.