STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEN83_04495Unannotated protein. (420 aa)    
Predicted Functional Partners:
BEN83_01885
Unannotated protein.
  
     0.747
AYP69_10245
Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.729
AYP69_05115
Unannotated protein; Belongs to the UPF0346 family.
 
     0.721
divIB
Unannotated protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.721
BEN83_04605
Unannotated protein; Belongs to the UPF0398 family.
  
     0.668
AYP69_06000
Unannotated protein.
  
     0.654
BEN83_06985
Unannotated protein.
  
     0.651
BEN83_06145
Unannotated protein.
  
     0.617
BEN83_01395
Unannotated protein.
 
    0.616
BEN83_07135
Unannotated protein.
 
    0.600
Your Current Organism:
Lactobacillus agilis
NCBI taxonomy Id: 1601
Other names: CCUG 31450, CIP 101264, DSM 20509, L. agilis, LMG 9186, LMG:9186, NRRL B-14856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.